Viral pneumonia

DOID EFO MESH SNOMED PheWeb

J10_VIRALPNEUMO

viral pneumonia: Inflammation of the lung parenchyma that is caused by a viral infection.

Endpoint definition

↥

FinnGen phenotype data

392423 individuals

diagram downward connector

Apply sex-specific rule None

392423

diagram downward connector

Check conditions None

392423

diagram downward connector

Check pre-conditions, main-only, mode, registry filters

Hospital Discharge: ICD-10 J12|J171|J100|J110|B012|B068|B250

Hospital discharge: ICD-9 480|4870A

Hospital discharge: ICD-8 48099|47101|47109

Cause of death: ICD-10 J12|J171|J100|J110|B012|B068|B250

Cause of death: ICD-9 480|4870A

Cause of death: ICD-8 48099|47101|47109

2 out of 7 registries used, show all original rules.

3561

diagram downward connector

Check minimum number of events None

3561

diagram downward connector

Include endpoints None

3561

diagram downward connector

diagram downward connector

Remove individuals based on genotype QC

3394

diagram downward connector

J10_VIRALPNEUMO

Control definitions

Control exclude J10_INFLUPNEU

Extra metadata

Level in the ICD hierarchy 3

First used in FinnGen datafreeze DF2

NAME	J10_VIRALPNEUMO
CONTROL_EXCLUDE	J10_INFLUPNEU
CONTROL_PRECONDITIONS
CONTROL_CONDITIONS
SEX
INCLUDE
PRE_CONDITIONS
CONDITIONS
OUTPAT_ICD
OUTPAT_OPER
HD_MAINONLY
HD_ICD_10_ATC
HD_ICD_10	J12\|J171\|J100\|J110\|B012\|B068\|B250
HD_ICD_9	480\|4870A
HD_ICD_8	48099\|47101\|47109
HD_ICD_10_EXCL
HD_ICD_9_EXCL
HD_ICD_8_EXCL
COD_MAINONLY
COD_ICD_10	J12\|J171\|J100\|J110\|B012\|B068\|B250
COD_ICD_9	480\|4870A
COD_ICD_8	48099\|47101\|47109
COD_ICD_10_EXCL
COD_ICD_9_EXCL
COD_ICD_8_EXCL
OPER_NOM
OPER_HL
OPER_HP1
OPER_HP2
KELA_REIMB
KELA_REIMB_ICD
KELA_ATC_NEEDOTHER
KELA_ATC
KELA_VNRO_NEEDOTHER
KELA_VNRO
CANC_TOPO
CANC_TOPO_EXCL
CANC_MORPH
CANC_MORPH_EXCL
CANC_BEHAV

Show upset plot detailing case counts by codes

Or the full data table

Similar endpoints

↥

List of similar endpoints to Viral pneumonia based on the number of shared cases.

Broader endpoints:

Narrower endpoints:

None

Show all endpoint correlations

Summary Statistics

↥

Key figures

	All	Female	Male
Number of individuals	3394	1614	1780
Unadjusted prevalence (%)	0.90	0.77	1.07
Mean age at first event (years)	50.54	48.09	52.75

Mortality

Follow-up	Absolute risk	HR [95% CI]	p	N
1998–2019	0.08	5.55 [3.87, 7.97]	1.4e-20	498
15 years	0.01	1.19 [0.79, 1.81]	4.0e-1	93
5 years	0.00	4.06 [2.69, 6.13]	2.7e-11	169
1 year	-	-	-	-

Age distribution of first events

Year distribution of first events

Cumulative Incidence

Correlations

↥

Index endpoint: J10_VIRALPNEUMO – Viral pneumonia
GWS hits:

Survival analyses between endpoints

↥

Plot

before Viral pneumonia
after Viral pneumonia

Loading survival analyses plot

Table

Loading survival analyses table

Drugs most likely to be purchased after Viral pneumonia

↥

Endpoint not on priority list, no data to show.