Endpoint definition
↥
FinnGen phenotype data
individuals
Apply sex-specific rule None
Check conditions
HLP_C3_NSCLC_SQUAM
Check pre-conditions, main-only, mode, registry filters
Cause of death: ICD-10
C34
Cause of death: ICD-9
162
Cause of death: ICD-8
162
Cancer registry: Topography ICD-O-3
C34
Cancer registry: Morphology ICD-O-3
8070
Cancer registry: Behaviour codes
3
2 out of 7 registries used, show all original rules.
-
Check minimum number of events None
-
Remove individuals based on genotype QC
1413
C3_NSCLC_SQUAM_EXALLC
Control definitions
Control exclude
C3_CANCER, C3_CANCER_WIDE
Control conditions
not HLP_C3_NSCLC_SQUAM
Extra metadata
Level in the ICD hierarchy
C
First used in FinnGen datafreeze
DF8
Show upset plot detailing case counts by codes
Or the full data table
Non-small cell lung cancer, squamous (controls excluding all cancers)
based on the number of shared cases.
Broader endpoints:
Narrower endpoints:
Loading survival analyses plot