Benign neoplasm: Liver/bile ducts (ICD-9)

DOID EFO MESH SNOMED PheWeb

CD2_BENIGN_LIVER_BILE_9

biliary tract neoplasm: A neoplasm that involves the biliary tract.

Endpoint definition

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FinnGen phenotype data

392423 individuals

Apply sex-specific rule None

392423

Check conditions None

392423

Check pre-conditions, main-only, mode, registry filters

Hospital discharge: ICD-9 2115

Cause of death: ICD-9 2115

2 out of 7 registries used, show all original rules.

Check minimum number of events None

Include endpoints None

Remove individuals based on genotype QC

CD2_BENIGN_LIVER_BILE_9

Control definitions

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy 4

First used in FinnGen datafreeze DF2

NAME	CD2_BENIGN_LIVER_BILE_9
CONTROL_EXCLUDE
CONTROL_PRECONDITIONS
CONTROL_CONDITIONS
SEX
INCLUDE
PRE_CONDITIONS
CONDITIONS
OUTPAT_ICD
OUTPAT_OPER
HD_MAINONLY
HD_ICD_10_ATC
HD_ICD_10	$!$	The FinnGen clinical team has checked and no code can be used for this rule.
HD_ICD_9	2115
HD_ICD_8	$!$	The FinnGen clinical team has checked and no code can be used for this rule.
HD_ICD_10_EXCL
HD_ICD_9_EXCL
HD_ICD_8_EXCL
COD_MAINONLY
COD_ICD_10	$!$	The FinnGen clinical team has checked and no code can be used for this rule.
COD_ICD_9	2115
COD_ICD_8	$!$	The FinnGen clinical team has checked and no code can be used for this rule.
COD_ICD_10_EXCL
COD_ICD_9_EXCL
COD_ICD_8_EXCL
OPER_NOM
OPER_HL
OPER_HP1
OPER_HP2
KELA_REIMB
KELA_REIMB_ICD
KELA_ATC_NEEDOTHER
KELA_ATC
KELA_VNRO_NEEDOTHER
KELA_VNRO
CANC_TOPO
CANC_TOPO_EXCL
CANC_MORPH
CANC_MORPH_EXCL
CANC_BEHAV

Not enough data for upset plot.

Or the full data table

Similar endpoints

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List of similar endpoints to Benign neoplasm: Liver/bile ducts (ICD-9) based on the number of shared cases.

Broader endpoints:

Narrower endpoints:

Benign neoplasm: Liver/bile ducts (ICD-9) (controls excluding all cancers)

Show all endpoint correlations

Summary Statistics

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Key figures

	All	Female	Male
Number of individuals	24	17	7
Unadjusted prevalence (%)	0.01	0.01	0.00
Mean age at first event (years)	41.91	39.35	48.12

Mortality

Follow-up	Absolute risk	HR [95% CI]	p	N
1998–2019	-	-	-	-
15 years	-	-	-	-
5 years	-	-	-	-
1 year	-	-	-	-

Age distribution of first events

Year distribution of first events

Cumulative Incidence

Correlations

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Index endpoint: CD2_BENIGN_LIVER_BILE_9 – Benign neoplasm: Liver/bile ducts (ICD-9)
GWS hits:

Survival analyses between endpoints

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Not a core endpoint, no data to show.

Drugs most likely to be purchased after Benign neoplasm: Liver/bile ducts (ICD-9)

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Endpoint not on priority list, no data to show.

≡ Risteys

R9

R8

R7

R6

R5

R4

R3